L’objectif de l’équipe BioDIS est de proposer une analyse des interactions des sols dans leur contexte environnemental, dans le but de prédire le fonctionnement biologique et l’évolution des sols.
Notre stratégie de recherche propose d’étudier les interactions biologiques en prenant en compte les contraintes abiotiques (qui ne sont pas liées à l’activité d’êtres vivants) qui régulent ou modulent ces interactions, selon trois axes de recherche :
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une analyse fonctionnelle des interactions, selon qu’elles soient de nature physique, chimique et/ou biochimique et les répercussions sur les fonctions émergentes du sol ;
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une analyse spatiale, nommée biogéographie des interactions, dans laquelle nous tenterons de mettre en évidence l’impact de la structuration spatiale sur l’organisation des interactions à différentes échelles (du paysage à l’habitat microbien) ;
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une analyse temporelle, nommée évolution des interactions, dans laquelle nous analyserons l’impact de la sélection naturelle, des flux de gènes et de la dérive génétique sur les interactions.
Seule une intégration de ces différents aspects permet la compréhension et la prédiction du fonctionnement des sols.
Le sol est un système complexe et constitue un élément fondamental des écosystèmes terrestres. Il participe à la réalisation d’un grand nombre de services écosystémiques, tels que la production de nourriture, l’épuration des eaux, le recyclage des déchets organiques ou le stockage de carbone.
Une particularité du sol est sa très forte structuration spatiale conduisant à la coexistence d’une multitude d’habitats aux propriétés variées. L’organisation spatiale des pores et des éléments solides du sol conduit à une distribution de l’oxygène, des solutés ou de l’eau extrêmement complexe et dont les gradients peuvent être très forts sur une distance d’à peine quelques micromètres.
Ces environnements sont également très dynamiques puisque leurs propriétés physico-chimiques peuvent changer rapidement, sous l’effet de l’activité microbienne, des racines des plantes et des vers de terre. Ceci a pour conséquence une modification rapide des contraintes sélectives auxquelles sont soumis les organismes du sol, en particulier due à la capacité de nombre d’entre eux à créer leur propre niche écologique.
La notion d’habitat en interaction avec l’activité biologique apparaît donc centrale pour mieux comprendre le fonctionnement biologique du sol. Plus que tout autre domaine de l’écologie, l’écologie des sols doit intégrer les interactions biotiques-abiotiques et les interactions entre micro- et macroorganismes.
Publications de l'équipe
Ne concerne que les publications de 2017 à aujourd’hui. Pour voir toutes les publications dirigez-vous vers la page Publications.
| Référence | Liens | Journal | Equipes et départements impliqués |
|---|---|---|---|
| Justine J.-L., Marie A. D., Gastineau R., Fourcade Y.*, Winsor L. (2022) The invasive land flatworm Obama nungara in La Réunion, a French island in the Indian Ocean, the first report of the species for Africa. Zootaxa, 5154: 469 476 | 10.11646/zootaxa.5154.4.4 | Zootaxa | BioDIS – DCFE |
| Pongmala, K.~, A. Pierret*, P. Oliva, A. Pando*, V. Davong`, S. Rattanavong`, N. Silvera*, M. Luangraj`, L. Boithias, K. Xayyathip` L. Menjot, M. Macouin, E. Rochelle-Newall*, H. Robain*, A. Vongvixay`, A. J. H. Simpson, D. A. B. Dance and O. Ribolzi (2022). “Distribution of Burkholderia pseudomallei within a 300-cm deep soil profile: implications for environmental sampling.” Scientific Reports 12(1): 8674. | 10.1038/s41598-022-12795-0 | Scientific Reports | CoMiC – DCFE ; F2ZC – Sols_ZC ; BioDIS – DCFE |
| Changey F, Nunan N.*, Herrmann A.H., Lerch T.Z.* (2022) Catching change in microbial diversity indicators under different soil organic matter managements: Higher taxonomic resolution, better discrimination? | 10.1016/j.ecolind.2022.108897 🔗 HAL | Ecological Indicators | BioDIS – DCFE |
| Fourcade, Y.*, & Vercauteren, M.° (2022). Predicted changes in the functional structure of earthworm assemblages in France driven by climate change. Diversity and Distributions 28: 1050-1066. | 10.1111/ddi.13505 🔗 HAL | Diversity and Distributions | BioDIS – DCFE |
| Fourcade, Y.,* Winsor, L., & Justine, J.-L. (2022). Hammerhead worms everywhere ? Modelling the invasion of bipaliin flatworms in a changing climate. Diversity and Distributions, 28: 844-858. | 10.1111/ddi.13489 🔗 HAL | Diversity and Distributions | BioDIS – DCFE |
| Sonntag, S.°, & Fourcade, Y.* (2022). Where will species on the move go? Insights from climate connectivity modelling across European terrestrial habitats. Journal for Nature Conservation, 66, 126139 | 10.1016/j.jnc.2022.126139 | Journal for Nature Conservation | BioDIS – DCFE |
| Alexandre Coche, Tristan Babey, Alain Rapaport, Laure Vieuble Gonod, Patricia Garnier, Naoise Nunan*, Jean-Raynald de Dreuzy (2022) Competition within low-density bacterial populations as an unexpected factor regulating carbon decomposition in bulk soil. Soil Biology and Biochemistry,164,108423, | 10.1016/j.soilbio.2021.108423 🔗 HAL | Soil Biology & Biochemistry | BioDIS – DCFE |
| Fourcade Y.* (2021) Fine-tuning niche models matters in invasion ecology. A lesson from the land planarian Obama nungara. Ecological Modelling, 457: 109686, 10.1016/j.ecolmodel.2021.109686 | 10.1016/j.ecolmodel.2021.109686 | Ecological Modelling | BioDIS – DCFE |
| Iry Andrianjara~, Marianne Bordenave-Jacquemin*, Virginie Roy*, Cécile Cabassa*, Pierre Federici*, David Carmignac*, Yoan Marcangeli*, Germinal Rouhan, Mathilde Renard, François Nold, Jean-Christophe Lata*, Patricia Genet*, Séverine Planchais* (2021) Urban tree management: diversity of Tilia genus in streets and parks of Paris based on morphological and genetic characteristics, Urban Forestry & Urban Greening | 10.1016/j.ufug.2021.127382 🔗 HAL | URBAN FORESTRY & URBAN GREENING | APCE – IPE ;BioDIS – DCFE ; EERI – DCFE ; EMS – DCFE ; ESEAE – EcoEvo |
| Zhang, N., Nunan, N.*, Hirsch, P.R., Sun B., Zhou J., Liang Y. (2021) Theory of microbial coexistence in promoting soil–plant ecosystem health. Biology & Fertility of Soils, (sous presse) | 10.1007/s00374-021-01586-w | Biology & Fertility of Soils | BioDIS – DCFE |
| Mbé, B., Monga, O., Pot, V., Otten, W., Hecht, F., Raynaud, X.*, Nunan, N.*, Chenu, C., Baveye, P.C., & Garnier, P. 2021. Scenario modelling of carbon mineralization in3D soil architecture at the microscale: Toward an accessibility coefficient of organic matter for bacteria. European Journal of Soil Science. | 10.1111/ejss.13144 | European Journal of Soil Science | BioDIS – DCFE ; EERI – DCFE ; EMS – DCFE |
| Hugoni M, Nunan N*, Thioulouse J, Dubost A, Abrouk D, Martins JMF, Goffner D, Prigent-Combaret C, Grundmann G (2021) Small-Scale Variability in Bacterial Community Structure in Different Soil Types. Microbial Ecology (sous presse) | 10.1007/s00248-020-01660-0 🔗 HAL | Microbial Ecology | BioDIS – DCFE |
| Nakhle, P.; Boithias, L.; Pando-Bahuon, A*.; Thammahacksa,C.`; Gallion, N.; Sounyafong, P`.; Silvera, N*.; Latsachack, K.`; Soulileuth,B.`; Rochelle-Newall, E.J*.; Marcangeli, Y;* Pierret, A*; Ribolzi, O*. Decay Rate of Escherichia coli in a Mountainous Tropical Headwater Wetland. Water 2021, 13, 2068., https://doi.org/10.3390/w13152068 | 10.3390/w13152068 | Water | BioDIS – DCFE ; CoMiC – DCFE ; EMS – DCFE ; FEST – Sols_ZC |
| Fourcade, Y*, Astrom S, Öckinger E (2021) Decline of parasitic and habitat-specialist species drives taxonomic, phylogenetic and functional homogenization of sub-alpine bumblebee communities. Oecologia, 196: 905-917, 10.1007/s00442-021-04970-3 | 10.1007/s00442-021-04970-3 | Oecologia | BioDIS – DCFE |
| Kleber, M., Bourg, I.C., Coward, E.K., Hansel, C.M., Myneni, S.C.B., Nunan, N*., 2021. Dynamic interactions at the mineral–organic matter interface. Nature Reviews Earth & Environment. | 10.1038/s43017-021-00162-y 🔗 HAL | Nature Reviews Earth & Environment | BioDIS – DCFE |
| Fourcade Y.*, WallisDeVries M.F., Kuussaari M., Van Swaay C.A.M., Heliölä J., Öckinger E. (2021) Habitat amount and distribution modify community dynamics under climate change. Ecology Letters, 24, 950-957 | 10.1111/ele.13691 🔗 HAL | Ecology Letters | BioDIS – DCFE |
| Laurie Boithias, Yves Auda, Stéphane Audry, Jean-Pierre Bricquet, Alounsavath Chanhphengxay`, Vincent Chaplot, Anneke de Rouw*, Thierry Henry des Tureaux*, Sylvain Huon*, Jean-Louis Janeau*, Keooudone Latsachack`, Yann Le Troquer*, Guillaume Lestrelin, Jean-Luc Maeght, Pierre Marchand, Pierre Moreau, Andrew Noble, Anne Pando-Bahuon*, Kongkeo Phachomphon`, Khambai Phanthavong`, Alain Pierret*, Olivier Ribolzi, Jean Riotte, Henri Robain*, Emma Rochelle-Newall*, Saysongkham Sayavong`, Oloth Sengtaheuanghoung`, Norbert Silvera*, Nivong Sipaseuth`, Bounsamay Soulileuth`, Xaysatith Souliyavongsa`, Phapvilay Sounyaphong`, Sengkeo Tasaketh`, Chanthamousone Thammahacksa`, Jean-Pierre Thiebaux, Christian Valentin*, Olga Vigiak, Marion Viguier^, Khampaseuth Xayyathip`.(2021) The Multiscale TROPIcal CatchmentS critical zone observatory M-TROPICS dataset II: Land use, hydrology and sediment production monitoring in Houay Pano, northern Lao PDR. Hydrological Processes. 2021;35:e14126. | 10.1002/hyp.14126 🔗 HAL | Hydrological Processes | BioDIS – DCFE ; CoMiC – DCFE ; FEST – Sols_ZC ; F2ZC – Sols_ZC |
| Maggia M.-E., Decaëns T., Lapied E., Dupont L.*, Roy V.*, Schimann H., Orivel J., Murienne J., Baraloto C., Cottenie K., Steinke D. At each site its diversity: DNA barcoding reveals remarkable earthworm diversity in neotropical rainforests of French Guiana. Applied Soil Ecology, 164 : 103932 | 10.1016/j.apsoil.2021.103932 | Applied Soil Ecology | BioDIS – DCFE |
| Kheir M., Lerch T.Z.*, Borsali A.H., Roche P., Ziarelli F., Zouidi M., Farnet Da Silva A.M. (2021) Litter microbial responses to climate change: how do inland or coastal context and litter type matter across the Mediterranean? Ecological Indicators 125: 107505 | 10.1016/j.ecolind.2021.107505 | Ecological Indicators | BioDIS – DCFE |
| Nakhle P., Ribolzi O., Boithias L., Rattanavong S., Auda Y., Sayavong S., Zimmermann R., Soulileuth B., Pando A*., Thammahacksa C., Rochelle-Newall E.J.*, Santini W., Martinez J-M., Gratiot N., Pierret A*.(2021) “Effects of hydrological regime and land use on in-stream Escherichia coli concentration in the Mekong basin, Lao PDR”. Scientific Reports, 11:3460. | 10.1038/s41598-021-82891-0 🔗 HAL | Scientific Reports | BioDIS – DCFE ; CoMiC – DCFE |
| Sisouvanh P’, Trelo-Ges V’., Isarangkool Na Ayutthaya S’., Pierret A.*, Nunan N*., Silvera N.*, Xayyathip K’., Hartmann C*. (2021) Can organic amendments improve soil physical characteristics and increase maize performances in contrasting soil water regimes? Agriculture, 11, 132. | 10.3390/agriculture11020132 | Agriculture | CoMiC – DCFE ; BioDIS – DCFE ; F2ZC – Sols_ZC |
| Nakhle P., Ribolzi O., Boithias L., Rattanavong S.’, Auda Y., Sayavong S.’, Zimmermann R.E., Soulileuth B.’, Pando A*., Tammahacksa C’., Rochelle-Newall E.*, Santinin W., Martinez J.-M., Gratiot N., Pierret A.* (2021) Effects of hydrological regime and land use on in-stream Escherichia coli concentration in the Mekong basin, Lao PDR, Scientific Reports – Nature 11:3460 | 10.1038/s41598-021-82891-0 | Scientific Reports | CoMiC – DCFE ; BioDIS – DCFE |
| Shi A, Chakrawal A, Manzoni S, Fischer BMC, Nunan N*, Herrmann AH (2021) Substrate spatial heterogeneity reduces soil microbial activity. Soil Biology & Biochemistry, 152, 108068 | 10.1016/j.soilbio.2020.108068 🔗 HAL | Soil Biology and Biochemistry | BioDIS – DCFE |
| Pham T.`°, Rumpel C.*, Capowiez Y., Jouquet P.*, Pelosi C., Pando A.*, Aroui Boukdiba H.*, Bottinelli N.*. (2021). Mid-infraned spectroscopy of earthworm bodies to investigate their species belonging and their relationship with the soil they inhabit. Applied Soil Ecology 162. | 10.1016/j.apsoil.2021.103894 🔗 HAL | Applied Soil Ecology | BioDIS – DCFE ; FEST – Sols_ZC |
| Guttières R~, Nunan N*, Raynaud X*, Lacroix G*, Barot S*, Barré P, Girardin C, Guenet B, Lata J-C*, Abbadie L*. 2021. Temperature and soil management effects on carbon fluxes and priming effect intensity. Soil Biology and Biochemistry 153: 108103 | 10.1016/j.soilbio.2020.108103 🔗 HAL | Soil Biology and Biochemistry | EMS – DCFE ; BioDIS – DCFE |
| Alhajeri B., Fourcade Y.*, Upham N. S., Alhaddad H. (2020) A global test of Allen’s rule in Rodents. Global Ecology & Biogeography, 29: 2248-2260 | 10.1111/geb.13198 | Global Ecology & Biogeography | BioDIS – DCFE |
| Foti L~, Barot S*, Gignoux J*, Grimaldi M*, Lata J-C*, Lerch T.Z.*, Nold F, Nunan N*, Raynaud X*, Abbadie L*, Dubs F* 2020. Topsoil characteristics of forests and lawns along an urban-rural gradient in the Paris region. Soil Use and Management: 1-13 | 10.1111/sum.12640 🔗 HAL | Soil Use and Management | EMS – DCFE ; BioDIS – DCFE ; FEST – Sols_ZC |
| Frerejacques M., Rousselle C., Gauthier L., Cottet-Emard S., Derobert L., Roynette A., Lerch T.Z.*, Changey F. (2020) Human skin bacterial community response to probiotic (Lactobacillus reuteri DSM 17938) introduction. Microorganisms 8, 1223 | 10.3390/microorganisms8081223 🔗 HAL | Microorganisms | BioDIS – DCFE |
| Widhalm T., Fourcade Y.*, Frank T., Öckinger, E. (2020) Population dynamics of the butterfly Pyrgus armoricanus after translocation beyond its northern range margin. Insect Conservation and Diversity, 13: 617-629 | 10.1111/icad.12430 | Insect Conservation and Diversity | BioDIS – DCFE |
| Borsali A.H., Lerch T.Z.*, Besbes R., Gros R., Laffont-Schwob I., Boudenne J.L., Ziarelli F., Pando A.*, Farnet Da Silva A.M. (2021) Coastal environments shape chemical and microbial properties of forest litters in circum Mediterranean region assessment. European Journal of Soil 72: 1010-1025 | 10.1111/ejss.13023 🔗 HAL | European Journal of Soil Science | BioDIS – DCFE |
| Changey F^., Blaud A., Pando A*., Herrmann A., Lerch T.Z.*. (2020). Monitoring soil microbial communities using molecular tools: DNA extraction methods may offset long-term management effects. European Journal of Soil Science 72: 1026-1041 | 10.1111/ejss.13026 🔗 HAL | European Journal of Soil Science | BioDIS – DCFE |
| Lehmann, J., Hansel, C.M., Kaiser, C., Kleber, M., Maher, K., Manzoni, S., Nunan, N., Reichstein, M., Schimel, J.P., Torn, M.S., Wieder, W.R., Kögel-Knabner, I., 2020. Persistence of soil organic carbon caused by functional complexity. Nat. Geosci. 13, 529–534. | 10.1038/s41561-020-0612-3 🔗 HAL | Nature Geoscience | BioDIS – DCFE |
| Fourcade Y.*, Richardson D.S., Secondi J. (2020) No evidence for a loss of genetic diversity despite a strong decline in size of a European population of the corncrake Crex crex. Bird Conservation International, 30: 260-266 | 10.1017/S0959270919000327 | Bird Conservation International | BioDIS – DCFE |
| Célini L.*, Roy V.*, Delabie J., Frechault S.*, Mora P.* (2020). Présence de Solenopsis globularia (F. Smith, 1858) et Cardiocondyla emeryi Forel, 1881 (Formicidae : Myrmicinae) dans l’île de Saint Barthélemy aux Antilles Françaises. Bulletin de la Société Entomologique de France, 125 (2) : 145 162. | 10.32475/bsef_2061 | Bulletin de la Société Entomologique de France | BioDIS – DCFE ; ESEAE – EcoEvo |
| Nunan N, Schmidt H, Raynaud X. 2020. The ecology of heterogeneity: soil bacterial communities and C dynamics. Philosophical Transactions of the Royal Society B: Biological Sciences 375: 20190249. | 10.1098/rstb.2019.0249 🔗 HAL | Philosophical Transactions of the Royal Society B: Biological Sciences | EMS – DCFE ; BioDIS – DCFE |
| Pruvost C.~ , Mathieu J.*, Nunan N.,* Gigon A.*, Pando A.*, Lerch T.Z.*, Blouin M. 2020.Tree growth and macrofauna colonization in Technosols constructed from recycled urban wastes. Ecological Engineering, 153, 105886 | 10.1016/j.ecoleng.2020.105886 🔗 HAL | Ecological Engineering | BioDIS – DCFE ; EERI – DCFE |
| Taheri S.~, Decaëns T., Cunha L., Brown G.G., Da Silva E., Bartz M.L.C., Baretta D., Dupont L.* (2020) Genetic evidence of multiple introductions and mixed reproductive strategy in the peregrine earthworm Pontoscolex corethrurus. Biological Invasions, 22 : 2545-2557 | 10.1007/s10530-020-02270-0 🔗 HAL | Biological Invasions | BioDIS – DCFE |
| Chakrawal, A., Herrmann, A.M., Koestel, J., Jarsjö, J., Nunan, N., Kätterer, T., Manzoni, S., 2020. Dynamic upscaling of decomposition kinetics for carbon cycling models. Geoscientific Model Development 13, 1399–1429. | 10.5194/gmd-13-1399-2020 🔗 HAL | Geoscientific Model Development | BioDIS – DCFE |
| Baudrin G.°, Roy V.*, Gigon A.*, Dupont L.* (2020) Bar-HRM for identification of cryptic earthworm species. Pedobiologia – Journal of Soil Ecology, 80: 150634 | 10.1016/j.pedobi.2020.150634 | Journal of Soil Ecology | BioDIS – DCFE |
| Audusseau H.^, Vandenbulcke F., Dume C.°, Deschins V.°, Pauwels M., Gigon A.*, Bagard M.*, Dupont L.* (2020) Impacts of metallic trace elements on an earthworm community in an urban wasteland: Emphasis on the bioaccumulation and genetic characteristics in Lumbricus castaneus. Science of the Total Environnement, 718 : 137259 | 10.1016/j.scitotenv.2020.137259 🔗 HAL | Science of the Total Environment | BioDIS – DCFE ; APCE – IPE |
| Brunel C., Gros R., Lerch T.Z.*, Farnet Da Silva A.M. (2020) Changes in soil organic matter and microbial communities after fine and coarse residues inputs from Mediterranean tree species. Applied Soil Ecology 149: 103516 | 10.1016/j.apsoil.2020.103516 🔗 HAL | Applied Soil Ecology | BioDIS – DCFE |
| Paradelo R., Lerch T.Z.*, Houot S., Dignac M.-F.* (2019) Composting modifies the patterns of incorporation of OC and N from plant residues into soil aggregates. Geoderma, 353: 415-422. | 10.1016/j.geoderma.2019.07.025 🔗 HAL | Geoderma | CoMiC – DCFE ; BioDIS – DCFE |
| Lerch T.Z.*, Dignac M.-F.*, Thevenot M., Mguerchi C.°, Houot S. (2019) Chemical changes during composting of plant residues reduce their mineralisation in soil and cancel the priming effect. Soil Biology and Biochemistry, 136: 107525. | 10.1016/j.soilbio.2019.107525 🔗 HAL | Soil Biology and Biochemistry | CoMiC – DCFE ; BioDIS – DCFE |
| Changey F., Meglouli H., Fontaine J., Magnin-Robert M., Lerch T.Z.*, Lounès-Hadj Sahraoui A. (2019) Initial microbial status modulates mycorrhizal inoculation effect on rhizosphere microbial communities. Mycorrhiza 29(5): 475-487. | 10.1007/s00572-019-00914-1 🔗 HAL | Mycorrhiza | BioDIS – DCFE |
| Clement, C~., Pierret A*., Maeght JL., Hartmann C*., Xayyathip K’., Soulileuth B’., Sounyafong P.’, Latsachack K’., Thammahacksa C’., Sengtaheuanghoung O’. (2019) Linking tree‐rooting pro les to leaf phenology: a first attempt on Tectona Grandis Linn F. Trees 33, pages 1491–1504 (2019). | 10.1007/s00468-019-01876-9 🔗 HAL | Trees | CoMiC – DCFE ; BioDIS – DCFE |
| Alhajeri B.H., Fourcade Y.* (2019) High correlation between species-level environmental data estimates extracted from IUCN expert range maps and from GBIF occurrence data. Journal of Biogeography, 46: 1329-1341 | 10.1111/jbi.13619 | Journal of Biogeography | BioDIS – DCFE |
| Dupont L.*, Pauwels M., Dume C.°, Deschins V.°, Audusseau H.^, Gigon A.*, Dubs F., Vandenbulcke F. (2019) Genetic variation of the epigeic earthworm Lumbricus castaneus populations in urban soils of the Paris region (France) revealed using eight newly developed microsatellite markers. Applied Soil Ecology, 135 : 33-37 | 10.1016/j.apsoil.2018.11.004 🔗 HAL | Applied Soil Ecology | BioDIS – DCFE |
| James S.W., Bartz M.L.C., Stanton D.W.G., Conrado A.C.,Dupont L.*,Taheri S.~, Da Silva E., Cunha L., Brown G.G. (2019) A neotype for Pontoscolex corethrurus (Müller, 1857) (Clitellata). Zootaxa, 4545 (1) : 124-132 | 10.11646/zootaxa.4545.1.7 🔗 HAL | Zootaxa | BioDIS – DCFE |
| Schmidt, H., Nunan, N.*, Höck, A., Eickhorst, T., Kaiser, C., Woebken, D., Raynaud, X.*, 2018. Recognizing Patterns: Spatial Analysis of Observed Microbial Colonization on Root Surfaces. Frontiers in Environmental Science 6. | 10.3389/fenvs.2018.00061 🔗 HAL | Frontiers in Environmental Science | BioDIS – DCFE ; EMS – DCFE |
| Fourcade Y.* ,Åström S., Öckinger E. (2019) Climate and land-cover change alter bumblebee species richness and community composition in subalpine areas. Biodiversity and Conservation, 28: 639–653 | 10.1007/s10531-018-1680-1 | Biodiversity and Conservation | BioDIS – DCFE |
| Fourcade Y.*, BesnardA.G., Beslot E., Hennique S., Mourgaud G., Berdin G., Secondi J (2018) Habitat selection in a dynamic seasonal environment: Vegetation composition drives the choice of the breeding habitat for the community of passerines in floodplain grasslands. Biological Conservation, 228: 301-309 | 10.1016/j.biocon.2018.11.007 | Biological Conservation | BioDIS – DCFE |
| Baveye, P.C., Otten, W., Kravchenko, A., Balseiro-Romero, M., Beckers, É., Chalhoub, M., Darnault, C., Eickhorst, T., Garnier, P., Hapca, S., Kiranyaz, S., Monga, O., Mueller, C.W., Nunan, N.*, Pot, V., Schlüter, S., Schmidt, H., Vogel, H.-J., 2018. Emergent Properties of Microbial Activity in Heterogeneous Soil Microenvironments: Different Research Approaches Are Slowly Converging, Yet Major Challenges Remain. Frontiers in Microbiology 9 | 10.3389/fmicb.2018.01929 🔗 HAL | Frontiers in Microbiology | BioDIS – DCFE |
| Van Groenigen, J.W., Agnelli, A., Bai, J., Capowiez, Y., Cayuela, M., Kögel-Knabner, I., Laird, D., McBratney, A., Morgan, C., Nater, E.A., Nunan, N., Said-Pullicino, D., Vepraskas, M., 2018. Citation stacking in soil science articles: our response to the open letter by concerned early-career soil scientists. Geoderma 328, 119–120. | 10.1016/j.geoderma.2018.03.023 | Geoderma | BioDIS – DCFE |
| Obiakara M.C., Fourcade Y.* (2018) Climatic niche and potential distribution of Tithonia diversifolia (Hemsl.) A. Gray in Africa. PlosOne, 13: e0202421 | 10.1371/journal.pone.0202421 | PLoS ONE | BioDIS – DCFE |
| Sengtaheuanghoung O., Ribolzi O., Rochelle-Newall E. J.*, Boithias L., Evrard O., Henri-des-Tureaux T.*, Huon S.*, Janeau J.-L*., Latsachack K*., Lefèvre I., Mouche E., Robain H.*, de Rouw A.*, Xayyathip K.*, Silvera N.*, Sisouvanh P~., Soulileuth B.*, Sounyafong P*., Thammahacksa C*., Viguier M., Lacombe G., Valentin C. & Pierret. A.*, Interactions between land use, fluxes of water and sediments, and the spread of bacterial contaminants in the uplands of northern Lao PDR. In: Nations, F. A. O. (ed) Proceedings of the Global Symposium on Soil Pollution 2018, Rome, Italy, 2018. FAO, p 976. | FAO Editions | CoMiC – DCFE ; BioDIS – DCFE ; F2ZC – Sols_ZC ; FEST – Sols_ZC | |
| Changey F.^, Bagard M.*, Souleymane M.°, Lerch T.Z.* (2018) Cascading effects of elevated ozone on wheat rhizosphere microbial communities depend on temperature and cultivar sensitivity. Environmental Pollution 242: 113-125 | 10.1016/j.envpol.2018.06.073 🔗 HAL | Environmental Pollution | BioDIS – DCFE ; EcoPhyS – IPE |
| Porco D., Chang C.-H.,Dupont L.*, James S., Richard B. , Decaëns T. (2018) A reference library of DNA barcodes for the earthworms from Upper Normandy: Biodiversity assessment, new records, potential cases of cryptic diversity and ongoing speciation. Applied Soil Ecology, 124 : 362-371 | 10.1016/j.apsoil.2017.11.001 🔗 HAL | Applied Soil Ecology | BioDIS – DCFE |
| Taheri S.~, James S.W., Roy V.*, Decaëns T., Williams B.W., Anderson F., Rougerie R., Chang C.-H., Brown G. G., Cunha L., Stanton D. W. G., Silva E.D., Chen J.-H., Lemmon A., Bartz M., Baretta D., Barois I., Lapied E., Coulis M., Dupont L.* (2018) Complex taxonomy of the ‘brush tail’ peregrine earthworm Pontoscolex corethrurus. Molecular Phylogenetics and Evolution, 124, 60-70. | 10.1016/j.ympev.2018.02.021 🔗 HAL | Molecular Phylogenetics and Evolution | BioDIS – DCFE |
| Mathieu J.*, Caro G.~ & Dupont L.* (2018) Methods for studying earthworm dispersal. Applied Soil Ecology, 123 : 339-344 | 10.1016/j.apsoil.2017.09.006 🔗 HAL | Applied Soil Ecology | EERI – DCFE ; BioDIS – DCFE |
| Fougeyrollas R.~, Dolejšová K., Křivánek J., Sillam-Dussès D.*, Roisin Y., Hanus R., Roy V. *(2018) Dispersal and mating strategies in two neotropical soil-feeding termites, Embiratermes neotenicus and Silvestritermes minutus (Termitidae, Syntermitinae). Insectes Sociaux, 65, 251-262. | 10.1007/s00040-018-0606-y 🔗 HAL | Insectes Sociaux | BioDIS – DCFE ; ESEAE – EcoEvo |
| Milcu A.; Puga-Freitas R*.; Ellison A.M., Blouin M., Scheu S., Girin T., Freschet G.T., Rose L., Scherer-Lorenzen M., Barot S*., Lata J-C*., Cesarz S., Eisenhauer N., Gigon A*.,Weigelt A., Hansart A., Greiner A., Pando A*., Gessler A., Grignani C., Assandri D., Gleixner G., Le Galliard J-F*., Urban-Mead K., Laura Zavattaro L., MüllerM.E.H., LangeM., Martin Lukac M., Bonkowski M., Mannerheim N., Buchmann N., Butenschoen O., Rotter P., Seyhun R., Devidal S., Kayler Z., and J Roy J.(2018).Genotypic variability enhances the reproducibility of an ecological study. Nature Ecology and Evolution. 2, p279–287 | 10.1038/s41559-017-0434-x 🔗 HAL | Nature Ecology and Evolution | BioDIS – DCFE ; EMS – DCFE ; EcoPhyS – IPE ; VPA – EcoEvo |
| Taheri S.~, Pelosi C.,Dupont L.* (2018) Harmful or useful ? A case study of the exotic peregrine earthworm morphospeciesPontoscolex corethrurus. Soil Biology and Biochemistry, 116: 277-289 | 10.1016/j.soilbio.2017.10.030 🔗 HAL | Soil Biology and Biochemistry | BioDIS – DCFE |
| Agapit, C.~, Gigon, A.*, Puga-Freitas, R.*, Zeller, B., Blouin, M. Plant-earthworm interactions: influence of age and proportion of casts in the soil on plant growth, morphology and nitrogen uptake. Plant Soil 424, 49–61 (2018). | 10.1007/s11104-017-3544-y 🔗 HAL | Plant Soil | EcoPhyS – IPE ; BioDIS – DCFE |
| Fourcade Y.*, Besnard A.G., Secondi J. (2018) Paintings predict the distribution of species, or the challenge of selecting environmental predictors and evaluation statistics. Global Ecology and Biogeography, 27: 245-256 | 10.1111/geb.12684 🔗 HAL | Global Ecology & Biogeography | BioDIS – DCFE |
| Jouquet P*., Pando A*.; Aroui H*.; Harit A.`^; Capowiez Y.; Bottinelli N*.2017. Evidence from Mid-Infrared Spectroscopy (MIRS) that the biological fingerprints of Odontotermes obesus termite colonies change according to their geographical location and age. (2017). Insectes Sociaux 65:77–84 | 10.1007/s00040-017-0589-0 🔗 HAL | Insectes Sociaux | BioDIS – DCFE ; FEST – Sols_ZC |
| Deeb M.~, Desjardins T.*, Podwojewski P.*, Pando A.*, Blouin M., Lerch T.Z.* (2017) Interactive effects of compost, plants and earthworms on aggregation in constructed Technosols. Geoderma 305: 305–313 | 10.1016/j.geoderma.2017.06.014 🔗 HAL | Geoderma | BioDIS – DCFE ; FEST – Sols_ZC |
| Nunan, N.*, 2017. The microbial habitat in soil: Scale, heterogeneity and functional consequences. Journal of Plant Nutrition and Soil Science 180, 425–429. | 10.1002/jpln.201700184 🔗 HAL | Journal of Plant Nutrition and Soil Science | BioDIS – DCFE |
| Nunan, N.*, Leloup, J.*, Ruamps, L.S.~, Pouteau, V., Chenu, C., 2017. Effects of habitat constraints on soil microbial community function. Scientific Reports 7. | 10.1038/s41598-017-04485-z 🔗 HAL | Scientific Reports | BioDIS – DCFE ; EMS – DCFE |
| Foti L.~, Dubs F.^, Gignoux J.*, Lata J.C.*, Lerch T. Z*, Mathieu J.*, Nold F., Nunan N.*,Raynaud X.*, Abbadie L.*, Barot S.* (2017) Trace metal concentrations along a gradient of urban pressure in forest and lawn soils of the Paris region (France). Science of the Total Environment, 598: 938-948 | 10.1016/j.scitotenv.2017.04.111 🔗 HAL | Science of the Total Environment | EMS – DCFE ; BioDIS – DCFE ; EERI – DCFE |
| Fourcade Y.*, Ranius T., Öckinger E. (2017) Temperature drives abundance fluctuations, but spatial dynamics is constrained by landscape configuration: implications for climate-driven range shift in a butterfly. Journal of Animal Ecology, 86: 1339-1351 | 10.1111/1365-2656.12740 | Journal of Animal Ecology | BioDIS – DCFE |
| Leloup, J.*, Baude, M.~, Nunan, N.*, Meriguet, J., Dajoz, I.*, Le Roux, X., Raynaud, X.* (2018) Unravelling the effects of plant species diversity and aboveground litter input on soil bacterial communities. Geoderma 317, 1–7. | 10.1016/j.geoderma.2017.12.018 🔗 HAL | Geoderma | EMS – DCFE ; BioDIS – DCFE ; EERI – DCFE |
| Vergnes A.^, Blouin M., Muratet A, Lerch T.Z.*, Mendez-Millan M., Rouelle-Castrec M., Dubs F.^ (2017) Initial conditions during Technosol implementation shape earthworms and ants diversity. Landscape and Urban Planning 159 : 32-41 | 10.1016/j.landurbplan.2016.10.002 🔗 HAL | Landscape and Urban Planning | BioDIS – DCFE |
| Lerch T.Z.*, Chenu C., Dignac M.-F.*, Barriuso E., Mariotti A. (2017) Biofilm vs planktonic lifestyle: consequences on pesticide 2,4-D biodegradation by Cupriavidus necator JMP134. Frontiers in Microbiology 8 : 90 | 10.3389/fmicb.2017.00904 🔗 HAL | Frontiers in Microbiology | BioDIS – DCFE ; CoMiC – DCFE |
| Fougeyrollas R.~, Křivánek J., Roy V.*, Dolejšová K., Frechault S.*, Roisin Y., Hanus R., Sillam-Dussès D. (2017). Asexual queen succession mediates an accelerated colony life cycle in the termite Silvestritermes minutus. Molecular Ecology, 26, 3295–3308 | 10.1111/mec.14095 🔗 HAL | Molecular Ecology | BioDIS – DCFE ; ESEAE – EcoEvo |
Membres de l'équipe
| Nom Prénom | Corps | Employeur | Département et Équipe | Adresse | Téléphone | Mél |
|---|---|---|---|---|---|---|
| DUPONT Lise | MC | Univ. Paris Est Créteil | Équipe BioDIS du Département DCFE | Univ. Paris Est Créteil bâtiment P – 4e étage – bureau : 418 | (+33) 01 45 17 16 64 | lise.dupont@u-pec.fr |
| EL MEKDAD Fatima | Doctorante | Sorbonne Université | Équipe BioDIS du Département DCFE | Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 2e étage – bureau : 218 | (+33) 01 44 27 47 30 | fatima.el_mekdad@sorbonne-universite.fr |
| FOURCADE Yoan | MC | Univ. Paris Est Créteil | Équipe BioDIS du Département DCFE | Univ. Paris Est Créteil bâtiment P – 4e étage – bureau : 422 | (+33) 01 45 17 14 69 | yoan.fourcade@u-pec.fr |
| GERGONNE Damien | Doctorant | CNRS | Équipe BioDIS du Département DCFE | Univ. Paris Est Créteil bâtiment P – 2e étage – bureau : 211 | gergonne.damien@gmail.com | |
| GIGON Agnes | IE | Univ. Paris Est Créteil | Équipe BioDIS du Département DCFE | Univ. Paris Est Créteil bâtiment P – 4e étage – bureau : 422 | (+33) 01 45 17 14 69 | gigon@u-pec.fr |
| GUEYE Mamadou | CDD AI | IRD | Équipe BioDIS du Département DCFE | IRD Bondy Batîment AB – 1er étage – bureau : 1 | (+33) 01 48 02 55 31 | mamadou.gueye@ird.fr |
| HARTMANN Christian | CR | IRD | Équipe BioDIS du Département DCFE | IRD Bondy bâtiment A – RDC – bureau : 114 | (+33) 01 48 02 59 71 | christian.hartmann@ird.fr |
| LERCH Thomas | MC | Univ. Paris Est Créteil | Équipe BioDIS du Département DCFE | IRD Bondy bâtiment A – RDC – bureau : 1 | (+33) 01 48 02 79 33 | thomas.lerch@u-pec.fr |
| MIKAJLO Irina | Post-doctorant | IRD | Équipe BioDIS du Département DCFE | IRD Bondy bâtiment A – RDC – bureau : A1 | (+33) 01 48 02 55 90 | irina.mikajlo@ird.fr |
| NUNAN Naoise | CR | CNRS | Équipe BioDIS du Département DCFE | Campus Pierre et Marie Curie – Paris 5e Tour 44-45 – 2e étage – bureau : 212 | (+33) 01 44 27 41 06 | naoise.nunan@upmc.fr |
| PANDO Anne | IR | IRD | Équipe BioDIS du Département DCFE | Expatriée à NAFRI/DALaM VIENTIANE LAOS Bat A – RDC – bureau : 01 | (+33) 01 48 02 55 90 | anne.pando@ird.fr |
| PRINTANIER Jean-François | CDD IE | IRD | Équipe BioDIS du Département DCFE | IRD Bondy bâtiment A – RDC – bureau : A114 | (+33) 01 48 02 79 41 | jean-francois.printanier@ird.fr |
| ROCHA ARAUJO Jose Hilario | Doctorant | Est-Ensemble | Équipe BioDIS du Département DCFE | IRD Bondy bâtiment B – Sous-sol étage – bureau : 8 | (+33) 01 80 25 698 | jose.araujo@ird.fr |
| ROY Virginie | MC | Univ. Paris Est Créteil | Équipe BioDIS du Département DCFE | Univ. Paris Est Créteil bâtiment P – 4e étage – bureau : P4-420 | (+33) 01 45 17 16 14 | roy@u-pec.fr |
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